PLoS genetics

A population genetics-phylogenetics approach to inferring natural selection in coding sequences.

PLoS genetics

Wilson DJ, Hernandez RD, Andolfatto P, Przeworski M

Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data.

PLoS genetics

Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD

Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence.

PLoS genetics

Torgerson DG, Boyko AR, Hernandez RD, Indap A, Hu X, White TJ, Sninsky JJ, Cargill M, Adams MD, Bustamante CD, Clark AG

Assessing the evolutionary impact of amino acid mutations in the human genome.

PLoS genetics

Boyko AR, Williamson SH, Indap AR, Degenhardt JD, Hernandez RD, Lohmueller KE, Adams MD, Schmidt S, Sninsky JJ, Sunyaev SR, White TJ, Nielsen R, Clark AG, Bustamante CD

Genome-wide patterns of nucleotide polymorphism in domesticated rice.

PLoS genetics

Caicedo AL, Williamson SH, Hernandez RD, Boyko A, Fledel-Alon A, York TL, Polato NR, Olsen KM, Nielsen R, McCouch SR, Bustamante CD, Purugganan MD

Genome-Wide Patterns of Nucleotide Polymorphism in Domesticated Rice.

PLoS genetics

Ana Caicedo, Scott Williamson, Ryan D Hernandez, Adam Boyko, Adi Fledel-Alon, Thomas York, Nicholas Polato, Ken Olsen, Rasmus Nielsen, Susan R. McCouch, Carlos D. Bustamante, Michael D. Purugganan